Journal: BMC Ophthalmology

Article Title: Prevalence of human papillomavirus in eyelid carcinoma among Koreans: a clinicopathological study

doi: 10.1186/s12886-023-03131-9

Figure Lengend Snippet: A representative case of eyelid squamous cell carcinoma with human papillomavirus (HPV). A : Hematoxylin and eosin staining. B : In situ hybridization shows a positive for HPV DNA. C : p16 immunohistochemistry shows positive staining. D : DNA microarray shows signals of HPV type 16 and E : HPV type 66

Article Snippet: PCR-based DNA microarray was performed using the GG HPV DNA Genotyping Chip Kit (Goodgene, Seoul, Korea).

Techniques: Staining, In Situ Hybridization, Immunohistochemistry, Microarray

Journal: Wellcome Open Research

Article Title: HPV infection and pre-term birth: a data-linkage study using Scottish Health Data

doi: 10.12688/wellcomeopenres.15140.1

Figure Lengend Snippet: Variable coding obtained or used for coding data. Table shows the variables obtained from the data linkage, the source of the data, the codes (ICD or otherwise) used in the original dataset and the codes used for each variable in the data analysis.

Article Snippet: HR HPV type , HPV types were detected. For some samples, multiple strains were detected. All positive results denote high-risk (HR) type. HR types: 16, 18, 31, 33, 35, 39, 45, 51, 52, 56, 58, 59, 66, 68. Some results given as "other HR HPV". Low risk (LR) types were only detected in samples that were specifically genotyped and classed as HR HPV negative. LR types: 6, 11, 40, 42, 43, 44, 53, 54, 61, 72, 73, 81. HR HPV assays used were Hybrid Capture 2 (Qiagen, Germany), Optiplex HR HPV test (Diamex, Germany), RealTime HR HPV assay (Abbott Molecular, USA), in house PCR assay or Linear Array HPV genotyping test (Roche, USA). Assays for individual genotypes used Optiplex HR HPV test, RealTime HR HPV assay or Linear Array HPV genotyping test. , , HPV Archive , Coded as : 0=HR HPV negative 1=HPV HR positive 9=HPV unknown If no genotype given but was positive, sample coded as HR HPV. If only LR genotypes present, sample was coded HR HPV negative For specific analysis of HPV 16/18 types, only those samples were used which had a known specific HPV type, coded as: 0=HR HPV negative 1= HPV 16/18 +ve: samples contained either or both of these types, regardless of other types contained therein. 2= non-16/non-18 HR types: samples contained known HR HPV types but not HPV-16 nor HPV-18.

Techniques: Derivative Assay, HPV Assay